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STRUCTURAL BIOINFORMATICSPDF|Epub|txt|kindle电子书版本网盘下载

STRUCTURAL BIOINFORMATICS
  • PHILIP E.BOURNE 著
  • 出版社： WILEY-LISS
  • ISBN：0471201995
  • 出版时间：2003
  • 标注页数：649页
  • 文件大小：87MB
  • 文件页数：669页
  • 主题词：

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图书目录

Section Ⅰ INTRODUCTION1

1 DEFINING BIOINFORMATICS AND STRUCTURAL BIOINFORMATICS&Russ B.Altman and Jonathan M.Dugan3

2 FUNDAMENTALS OF PROTEIN STRUCTURE&Eric D.Scheeff and J.Lynn Fink15

3 FUNDAMENTALS OF DNA AND RNA STRUCTURE&Stephen Neidle，Bohdan Schneider，and Helen M.Berman41

4 COMPUTATIONAL ASPECTS OF HIGH-THROUGHPUT CRYSTALLOGRAPHIC MACROMOLECULAR STRUCTURE DETERMINATION&Paul D.Adams，Ralf W Grosse-Kunstleve，and Axel T.Brunger75

5 MACROMOLECULAR STRUCTURE DETERMINATION BY NMR SPECTROSCOPY&John L.Markley，Eldon L.Ulrich，William M.Westler，and Brian F.Volkman89

6 ELECTRON MICROSCOPY&Niels Volkmann and Dorit Hanein115

7 MOLECULAR VISUALIZATION&John Tate135

Section Ⅱ DATA REPRESENTATION AND DATABASES159

8 THE PDB FORMAT，MMCIF FORMATS，AND OTHER DATA FORMATS&John D.Westbrook and P.M.D.Fitzgerald161

9 THE PROTEIN DATA BANK&The PDB Team181

10 THE NUCLEIC ACID DATABASE&Helen M.Berman，John Westbrook，Zukang Feng，Lisa Iype，Bohdan Schneider，and Christine Zardecki199

11 OTHER STRUCTURE-BASED DATABASES&Helge Weissig and Philip E.Bourne217

Section Ⅲ COMPARATIVE FEATURES237

12 PROTEIN STRUCTURE EVOLUTION AND THE SCOP DATABASE&Boojala V.B.Reddy and Philip E.Bourne239

13 THE CATH DOMAIN STRUCTURE DATABASE&C.A.Orengo，F.M.G.Pearl，and J.M.Thornton249

14 STRUCTURAL QUALITY ASSURANCE&Roman A.Laskowski273

15 ALL-ATOM CONTACTS：A NEW APPROACH TO STRUCTURE VALIDATION&Jane S.Richardson305

16 STRUCTURE COMPARISON AND ALIGNMENT&Philip E.Bourne and Ilya N.Shindyalov321

Section Ⅳ STRUCTURE AND FUNCTIONAL ASSIGNMENT339

17 SECONDARY STRUCTURE ASSIGNMENT&Claus A.F.Andersen and Burkhard Rost341

18 IDENTIFYING STRUCTURAL DOMAINS IN PROTEINS&Lorenz Wernisch and Shoshana J.Wodak365

19 INFERRING PROTEIN FUNCTION FROM STRUCTURE&Gail J.Bartlett，Annabel E.Todd，and Janet M.Thornton387

Section Ⅴ PROTEIN INTERACTIONS409

20 PREDICTION OF PROTEIN-PROTEIN INTERACTIONS FROM EVOLUTIONARY INFORMATION&Alfonso Valencia and Florencio Pazos411

21 ELECTROSTATIC INTERACTIONS&Nathan A.Baker and J.Andrew McCammon427

Section Ⅵ PROTEINS AS DRUG TARGETS441

22 PRINCIPLES AND METHODS OF DOCKING AND LIGAND DESIGN&J.Krumrine，F.Raubacher，N.Brooijmans，and I.Kuntz443

23 STRUCTURAL BIOINFORMATICS IN DRUG DISCOVERY&Eric B.Fauman，Andrew L.Hopkins，and Colin R.Groom477

Section Ⅶ STRUCTURE PREDICTION499

24 CASP AND CAFASP EXPERIMENTS AND THEIR FINDINGS&Philip E.Bourne501

25 HOMOLOGY MODELING&Elmar Krieger，Sander B.Nabuurs，and Gert Vriend509

26 FOLD RECOGNITION METHODS&Adam Godzik525

27 AB INITIO METHODS&Dylan Chivian，Timothy Robertson，Richard Bonneau，and David Baker547

28 PREDICTION IN 1D：SECONDARY STRUCTURE，MEMBRANE HELICES，AND ACCESSIBILITY&Burkhard Rost559

Section Ⅷ THE FUTURE589

29 STRUCTURAL GENOMICS&Stephen K.Burley and Jeffrey B.Bonanno591

INDEX613

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